Genetic abnormalities in the gene LRIF1, a rare cause of FSH2?

Facio-scapulo-humeral muscular dystrophy (FSH) is characterized by a relaxation of chromatin as well as a decrease (hypomethylation) of DNA in the D4Z4 region of chromosome 4, causing the expression of the DUX4 gene which codes for the eponymous transcription factor.

Two forms of FSH:

  • type 1 FSH (in 95% of cases) linked to a decrease in the number of repetitions of D4Z4 sequence ;
  • type 2 FSH (FSH2) linked to abnomalities in SMCHD1 gene, on chromosome 18 or to abnomalities in DNMT3B gene on chromosome 20.

By examining the muscle biopsy and the genetic profile of a patient with FSH2, the team of S. van der Maarel identified an abnormality in the LRIF1 gene on chromosome 1. The LRIF1 gene codes for a protein known to interact with SMCHD1 : they both play a role in the inactivation of the X chromosome in women by promoting the compaction of chromatin.

In this patient, the abnormality of the identified LRIF1 gene leads to a relaxation of the chromatin and the expression of DUX4 and the proteins it activates, which is the origin of an authentic form of FSH2.

 

Homozygous nonsense variant in LRIF1 associated with facioscapulohumeral muscular dystrophy.Hamanaka K, Šikrová D, Mitsuhashi S, Masuda H, Sekiguchi Y, Sugiyama A, Shibuya K, Lemmers RJLF, Goossens R, Ogawa M, Nagao K, Obuse C, Noguchi S, Hayashi YK, Kuwabara S, Balog J, Nishino I, van der Maarel SM. Neurology. 2020 (Mai).